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-rw-r--r--Python/pywarpx/callbacks.py410
1 files changed, 125 insertions, 285 deletions
diff --git a/Python/pywarpx/callbacks.py b/Python/pywarpx/callbacks.py
index 02a8f5aad..b8824d0ef 100644
--- a/Python/pywarpx/callbacks.py
+++ b/Python/pywarpx/callbacks.py
@@ -1,7 +1,9 @@
-# Copyright 2017 David Grote
+# Copyright 2017-2022 The WarpX Community
#
# This file is part of WarpX.
#
+# Authors: David Grote, Roelof Groenewald
+#
# License: BSD-3-Clause-LBNL
"""call back operations
@@ -10,41 +12,43 @@
These are the functions which allow installing user created functions so that
they are called at various places along the time step.
-For each call back type, the following three functions are defined.
- - install___: Installs a function to be called at that specified time
- - uninstall___: Uninstalls the function (so it won't be called anymore)
- - isinstalled___: Checks if the function is installed
+The following three functions allow the user to install, uninstall and verify
+the different call back types.
+ - installcallback: Installs a function to be called at that specified time
+ - uninstallcallback: Uninstalls the function (so it won't be called anymore)
+ - isinstalled: Checks if the function is installed
-These functions all take a function or instance method as an argument. Note that
-if an instance method is used, an extra reference to the method's object is saved.
+These functions all take a callback location name (string) and function or
+instance method as an argument. Note that if an instance method is used, an
+extra reference to the method's object is saved.
-The install can be done using a decorator, which has the prefix "callfrom". See example below.
+The install can be done using a decorator, which has the prefix "callfrom". See
+example below.
Functions can be called at the following times:
- - beforeInitEsolve <installbeforeInitEsolve>: before the initial solve for the E fields (i.e. before the PIC loop starts)
- - afterInitEsolve <installafterInitEsolve>: after the initial solve for the E fields (i.e. before the PIC loop starts)
- - afterinit <installafterinit>: immediately after the init is complete
- - beforeEsolve <installbeforeEsolve>: before the solve for E fields
- - poissonsolver <installpoissonsolver>: In place of the computePhi call but only in an electrostatic simulation
- - afterEsolve <installafterEsolve>: after the solve for E fields
- - beforedeposition <installbeforedeposition>: before the particle deposition (for charge and/or current)
- - afterdeposition <installafterdeposition>: after particle deposition (for charge and/or current)
- - beforestep <installbeforestep>: before the time step
- - afterstep <installafterstep>: after the time step
- - afterdiagnostics <installafterdiagnostics>: after diagnostic output
- - oncheckpointsignal <installoncheckpointsignal>: on a checkpoint signal
- - onbreaksignal <installonbreaksignal>: on a break signal. These callbacks will be the last ones executed
- before the simulation ends.
- - particlescraper <installparticlescraper>: just after the particle boundary conditions are applied
- but before lost particles are processed
- - particleloader <installparticleloader>: at the time that the standard particle loader is called
- - particleinjection <installparticleinjection>: called when particle injection happens, after the position
- advance and before deposition is called, allowing a user defined
- particle distribution to be injected each time step
- - appliedfields <installappliedfields>: allows directly specifying any fields to be applied to the particles
- during the advance
-
-To use a decorator, the syntax is as follows. This will install the function myplots to be called after each step.
+ - beforeInitEsolve: before the initial solve for the E fields (i.e. before the PIC loop starts)
+ - afterinit: immediately after the init is complete
+ - beforeEsolve: before the solve for E fields
+ - poissonsolver: In place of the computePhi call but only in an electrostatic simulation
+ - afterEsolve: after the solve for E fields
+ - beforedeposition: before the particle deposition (for charge and/or current)
+ - afterdeposition: after particle deposition (for charge and/or current)
+ - beforestep: before the time step
+ - afterstep: after the time step
+ - afterdiagnostics: after diagnostic output
+ - oncheckpointsignal: on a checkpoint signal
+ - onbreaksignal: on a break signal. These callbacks will be the last ones executed before the simulation ends.
+ - particlescraper: just after the particle boundary conditions are applied
+ but before lost particles are processed
+ - particleloader: at the time that the standard particle loader is called
+ - particleinjection: called when particle injection happens, after the position
+ advance and before deposition is called, allowing a user
+ defined particle distribution to be injected each time step
+ - appliedfields: allows directly specifying any fields to be applied to the particles
+ during the advance
+
+To use a decorator, the syntax is as follows. This will install the function
+``myplots`` to be called after each step.
@callfromafterstep
def myplots():
@@ -54,13 +58,10 @@ This is equivalent to the following:
def myplots():
ppzx()
-installafterstep(myplots)
+installcallback('afterstep', myplots)
"""
-from __future__ import generators
-
import copy
-import ctypes
import sys
import time
import types
@@ -84,12 +85,13 @@ class CallbackFunctions(object):
installed a method in one of the call back lists.
"""
- def __init__(self,name=None,lcallonce=0):
+ def __init__(self,name=None,lcallonce=0,singlefunconly=False):
self.funcs = []
self.time = 0.
self.timers = {}
self.name = name
self.lcallonce = lcallonce
+ self.singlefunconly = singlefunconly
def __call__(self,*args,**kw):
"""Call all of the functions in the list"""
@@ -100,9 +102,7 @@ class CallbackFunctions(object):
def clearlist(self):
"""Unregister/clear out all registered C callbacks"""
self.funcs = []
- libwarpx.libwarpx_so.warpx_clear_callback_py(
- ctypes.c_char_p(self.name.encode('utf-8'))
- )
+ libwarpx.libwarpx_so.remove_python_callback(self.name)
def __bool__(self):
"""Returns True if functions are installed, otherwise False"""
@@ -158,15 +158,15 @@ class CallbackFunctions(object):
def installfuncinlist(self,f):
"""Check if the specified function is installed"""
+ if self.singlefunconly and self.hasfuncsinstalled():
+ raise RuntimeError(
+ f"Only one function can be installed for callback {self.name}."
+ )
+
if len(self.funcs) == 0:
# If this is the first function installed, set the callback in the C++
# to call this class instance.
- # Note that the _c_func must be saved.
- _CALLBACK_FUNC_0 = ctypes.CFUNCTYPE(None)
- self._c_func = _CALLBACK_FUNC_0(self)
- libwarpx.libwarpx_so.warpx_set_callback_py(
- ctypes.c_char_p(self.name.encode('utf-8')), self._c_func
- )
+ libwarpx.libwarpx_so.add_python_callback(self.name, self)
if isinstance(f,types.MethodType):
# --- If the function is a method of a class instance, then save a full
# --- reference to that instance and the method name.
@@ -254,30 +254,51 @@ class CallbackFunctions(object):
#=============================================================================
+callback_instances = {
+ "beforeInitEsolve": {},
+ "afterInitEsolve": {},
+ "afterinit": {},
+ "beforecollisions": {},
+ "aftercollisions": {},
+ "beforeEsolve": {},
+ "poissonsolver": {'singlefunconly': True}, # external Poisson solver
+ "afterEsolve": {},
+ "beforedeposition": {},
+ "afterdeposition": {},
+ "particlescraper": {},
+ "particleloader": {},
+ "beforestep": {},
+ "afterstep": {},
+ "afterdiagnostics": {},
+ "afterrestart": {},
+ "oncheckpointsignal": {},
+ "onbreaksignal": {},
+ "particleinjection": {},
+ "appliedfields": {}
+}
+
# --- Now create the actual instances.
-_beforeInitEsolve = CallbackFunctions('beforeInitEsolve')
-_afterInitEsolve = CallbackFunctions('afterInitEsolve')
-_afterinit = CallbackFunctions('afterinit')
-_beforecollisions = CallbackFunctions('beforecollisions')
-_aftercollisions = CallbackFunctions('aftercollisions')
-_beforeEsolve = CallbackFunctions('beforeEsolve')
-_poissonsolver = CallbackFunctions('poissonsolver')
-_afterEsolve = CallbackFunctions('afterEsolve')
-_beforedeposition = CallbackFunctions('beforedeposition')
-_afterdeposition = CallbackFunctions('afterdeposition')
-_particlescraper = CallbackFunctions('particlescraper')
-_particleloader = CallbackFunctions('particleloader')
-_beforestep = CallbackFunctions('beforestep')
-_afterstep = CallbackFunctions('afterstep')
-_afterdiagnostics = CallbackFunctions('afterdiagnostics')
-_afterrestart = CallbackFunctions('afterrestart',lcallonce=1)
-_oncheckpointsignal = CallbackFunctions('oncheckpointsignal')
-_onbreaksignal = CallbackFunctions('onbreaksignal')
-_particleinjection = CallbackFunctions('particleinjection')
-_appliedfields = CallbackFunctions('appliedfields')
+for key, val in callback_instances.items():
+ callback_instances[key] = CallbackFunctions(name=key, **val)
+
+def installcallback(name, f):
+ "Adds a function to the list of functions called by this callback"
+ callback_instances[name].installfuncinlist(f)
+
+def uninstallcallback(name, f):
+ "Removes the function from the list of functions called by this callback"
+ callback_instances[name].uninstallfuncinlist(f)
+def isinstalled(name, f):
+ "Checks if the function is called by this callback"
+ return callback_instances[name].isinstalledfuncinlist(f)
+
+def clear_all():
+ for key, val in callback_instances.items():
+ val.clearlist()
#=============================================================================
+
def printcallbacktimers(tmin=1.,lminmax=False,ff=None):
"""Prints timings of installed functions.
- tmin=1.: only functions with time greater than tmin will be printed
@@ -285,18 +306,7 @@ def printcallbacktimers(tmin=1.,lminmax=False,ff=None):
- ff=None: If given, timings will be written to the file object instead of stdout
"""
if ff is None: ff = sys.stdout
- for c in [ _beforeInitEsolve, _afterInitEsolve,
- _afterinit,_beforeEsolve,_poissonsolver,_afterEsolve,
- _beforedeposition,_afterdeposition,
- _particlescraper,
- _particleloader,
- _beforestep,_afterstep,
- _afterdiagnostics,
- _afterrestart,
- _oncheckpointsignal,
- _onbreaksignal,
- _particleinjection,
- _appliedfields]:
+ for c in callback_instances.values():
for fname, time in c.timers.items():
#vlist = numpy.array(gather(time))
vlist = numpy.array([time])
@@ -316,299 +326,129 @@ def printcallbacktimers(tmin=1.,lminmax=False,ff=None):
ff.write('\n')
#=============================================================================
+
# ----------------------------------------------------------------------------
def callfrombeforeInitEsolve(f):
- installbeforeInitEsolve(f)
+ installcallback('beforeInitEsolve', f)
return f
def installbeforeInitEsolve(f):
- "Adds a function to the list of functions called before the initial E solve"
- _beforeInitEsolve.installfuncinlist(f)
-def uninstallbeforeInitEsolve(f):
- "Removes the function from the list of functions called before the initial E solve"
- _beforeInitEsolve.uninstallfuncinlist(f)
-def isinstalledbeforeInitEsolve(f):
- "Checks if the function is called before the initial E solve"
- return _beforeInitEsolve.isinstalledfuncinlist(f)
+ installcallback('beforeInitEsolve', f)
# ----------------------------------------------------------------------------
def callfromafterInitEsolve(f):
- installafterInitEsolve(f)
+ installcallback('afterInitEsolve', f)
return f
def installafterInitEsolve(f):
- "Adds a function to the list of functions called after the initial E solve"
- _afterInitEsolve.installfuncinlist(f)
-def uninstallafterInitEsolve(f):
- "Removes the function from the list of functions called after the initial E solve"
- _afterInitEsolve.uninstallfuncinlist(f)
-def isinstalledafterInitEsolve(f):
- "Checks if the function is called after the initial E solve"
- return _afterInitEsolve.isinstalledfuncinlist(f)
+ installcallback('afterInitEsolve', f)
# ----------------------------------------------------------------------------
def callfromafterinit(f):
- installafterinit(f)
+ installcallback('afterinit', f)
return f
def installafterinit(f):
- "Adds a function to the list of functions called after the init"
- _afterinit.installfuncinlist(f)
-def uninstallafterinit(f):
- "Removes the function from the list of functions called after the init"
- _afterinit.uninstallfuncinlist(f)
-def isinstalledafterinit(f):
- "Checks if the function is called after a init"
- return _afterinit.isinstalledfuncinlist(f)
+ installcallback('afterinit', f)
# ----------------------------------------------------------------------------
def callfrombeforecollisions(f):
- installbeforecollisions(f)
+ installcallback('beforecollisions', f)
return f
def installbeforecollisions(f):
- "Adds a function to the list of functions called before collisions"
- _beforecollisions.installfuncinlist(f)
-def uninstallbeforecollisions(f):
- "Removes the function from the list of functions called before collisions"
- _beforecollisions.uninstallfuncinlist(f)
-def isinstalledbeforecollisions(f):
- "Checks if the function is called before collisions"
- return _beforecollisions.isinstalledfuncinlist(f)
+ installcallback('beforecollisions', f)
# ----------------------------------------------------------------------------
def callfromaftercollisions(f):
- installaftercollisions(f)
+ installcallback('aftercollisions', f)
return f
def installaftercollisions(f):
- "Adds a function to the list of functions called after collisions"
- _aftercollisions.installfuncinlist(f)
-def uninstallaftercollisions(f):
- "Removes the function from the list of functions called after collisions"
- _aftercollisions.uninstallfuncinlist(f)
-def isinstalledaftercollisions(f):
- "Checks if the function is called after collisions"
- return _aftercollisions.isinstalledfuncinlist(f)
+ installcallback('aftercollisions', f)
# ----------------------------------------------------------------------------
def callfrombeforeEsolve(f):
- installbeforeEsolve(f)
+ installcallback('beforeEsolve', f)
return f
def installbeforeEsolve(f):
- "Adds a function to the list of functions called before an E solve"
- _beforeEsolve.installfuncinlist(f)
-def uninstallbeforeEsolve(f):
- "Removes the function from the list of functions called before an E solve"
- _beforeEsolve.uninstallfuncinlist(f)
-def isinstalledbeforeEsolve(f):
- "Checks if the function is called before an E solve"
- return _beforeEsolve.isinstalledfuncinlist(f)
+ installcallback('beforeEsolve', f)
# ----------------------------------------------------------------------------
def callfrompoissonsolver(f):
- installpoissonsolver(f)
+ installcallback('poissonsolver', f)
return f
def installpoissonsolver(f):
- """Installs an external function to solve Poisson's equation"""
- if _poissonsolver.hasfuncsinstalled():
- raise RuntimeError("Only one external Poisson solver can be installed.")
- _poissonsolver.installfuncinlist(f)
-def uninstallpoissonsolver(f):
- """Removes the external function to solve Poisson's equation"""
- _poissonsolver.uninstallfuncinlist(f)
-def isinstalledpoissonsolver(f):
- """Checks if the function is called to solve Poisson's equation"""
- return _poissonsolver.isinstalledfuncinlist(f)
+ installcallback('poissonsolver', f)
# ----------------------------------------------------------------------------
def callfromafterEsolve(f):
- installafterEsolve(f)
+ installcallback('afterEsolve', f)
return f
def installafterEsolve(f):
- "Adds a function to the list of functions called after an E solve"
- _afterEsolve.installfuncinlist(f)
-def uninstallafterEsolve(f):
- "Removes the function from the list of functions called after an E solve"
- _afterEsolve.uninstallfuncinlist(f)
-def isinstalledafterEsolve(f):
- "Checks if the function is called after an E solve"
- return _afterEsolve.isinstalledfuncinlist(f)
+ installcallback('afterEsolve', f)
# ----------------------------------------------------------------------------
def callfrombeforedeposition(f):
- installbeforedeposition(f)
+ installcallback('beforedeposition', f)
return f
def installbeforedeposition(f):
- "Adds a function to the list of functions called before a particle deposition"
- _beforedeposition.installfuncinlist(f)
-def uninstallbeforedeposition(f):
- "Removes the function from the list of functions called before a particle deposition"
- _beforedeposition.uninstallfuncinlist(f)
-def isinstalledbeforedeposition(f):
- "Checks if the function is called before a particle deposition"
- return _beforedeposition.isinstalledfuncinlist(f)
+ installcallback('beforedeposition', f)
# ----------------------------------------------------------------------------
def callfromafterdeposition(f):
- installafterdeposition(f)
+ installcallback('afterdeposition', f)
return f
def installafterdeposition(f):
- "Adds a function to the list of functions called after a particle deposition"
- _afterdeposition.installfuncinlist(f)
-def uninstallafterdeposition(f):
- "Removes the function from the list of functions called after a particle deposition"
- _afterdeposition.uninstallfuncinlist(f)
-def isinstalledafterdeposition(f):
- "Checks if the function is called after a particle deposition"
- return _afterdeposition.isinstalledfuncinlist(f)
+ installcallback('afterdeposition', f)
# ----------------------------------------------------------------------------
def callfromparticlescraper(f):
- installparticlescraper(f)
+ installcallback('particlescraper', f)
return f
def installparticlescraper(f):
- "Adds a function to the list of functions called to scrape particles"
- _particlescraper.installfuncinlist(f)
-def uninstallparticlescraper(f):
- "Removes the function from the list of functions called to scrape particles"
- _particlescraper.uninstallfuncinlist(f)
-def isinstalledparticlescraper(f):
- "Checks if the function is called to scrape particles"
- return _particlescraper.isinstalledfuncinlist(f)
+ installcallback('particlescraper', f)
# ----------------------------------------------------------------------------
def callfromparticleloader(f):
- installparticleloader(f)
+ installcallback('particleloader', f)
return f
def installparticleloader(f):
- "Adds a function to the list of functions called to load particles"
- _particleloader.installfuncinlist(f)
-def uninstallparticleloader(f):
- "Removes the function from the list of functions called to load particles"
- _particleloader.uninstallfuncinlist(f)
-def isinstalledparticleloader(f):
- "Checks if the function is called to load particles"
- return _particleloader.isinstalledfuncinlist(f)
+ installcallback('particleloader', f)
# ----------------------------------------------------------------------------
def callfrombeforestep(f):
- installbeforestep(f)
+ installcallback('beforestep', f)
return f
def installbeforestep(f):
- "Adds a function to the list of functions called before a step"
- _beforestep.installfuncinlist(f)
-def uninstallbeforestep(f):
- "Removes the function from the list of functions called before a step"
- _beforestep.uninstallfuncinlist(f)
-def isinstalledbeforestep(f):
- "Checks if the function is called before a step"
- return _beforestep.isinstalledfuncinlist(f)
+ installcallback('beforestep', f)
# ----------------------------------------------------------------------------
def callfromafterstep(f):
- installafterstep(f)
+ installcallback('afterstep', f)
return f
def installafterstep(f):
- "Adds a function to the list of functions called after a step"
- _afterstep.installfuncinlist(f)
-def uninstallafterstep(f):
- "Removes the function from the list of functions called after a step"
- _afterstep.uninstallfuncinlist(f)
-def isinstalledafterstep(f):
- "Checks if the function is called after a step"
- return _afterstep.isinstalledfuncinlist(f)
+ installcallback('afterstep', f)
# ----------------------------------------------------------------------------
def callfromafterdiagnostics(f):
- installafterdiagnostics(f)
+ installcallback('afterdiagnostics', f)
return f
def installafterdiagnostics(f):
- "Adds a function to the list of functions called after diagnostic output"
- _afterdiagnostics.installfuncinlist(f)
-def uninstallafterdiagnostics(f):
- "Removes the function from the list of functions called after diagnostic output"
- _afterdiagnostics.uninstallfuncinlist(f)
-def isinstalledafterdiagnostics(f):
- "Checks if the function is called after diagnostic output"
- return _afterdiagnostics.isinstalledfuncinlist(f)
-
-# ----------------------------------------------------------------------------
-def callfromafterrestart(f):
- raise Exception('restart call back not implemented yet')
- installafterrestart(f)
- return f
-def installafterrestart(f):
- "Adds a function to the list of functions called immediately after a restart"
- raise Exception('restart call back not implemented yet')
- _afterrestart.installfuncinlist(f)
-def uninstallafterrestart(f):
- "Removes the function from the list of functions called immediately after a restart"
- raise Exception('restart call back not implemented yet')
- _afterrestart.uninstallfuncinlist(f)
-def isinstalledafterrestart(f):
- "Checks if the function is called immediately after a restart"
- raise Exception('restart call back not implemented yet')
- return _afterrestart.isinstalledfuncinlist(f)
+ installcallback('afterdiagnostics', f)
# ----------------------------------------------------------------------------
def oncheckpointsignal(f):
- installoncheckpointsignal(f)
+ installcallback('oncheckpointsignal', f)
return f
def installoncheckpointsignal(f):
- "Adds a function to the list of functions called on checkpoint signal"
- _oncheckpointsignal.installfuncinlist(f)
-def uninstalloncheckpointsignal(f):
- "Removes the function from the list of functions called on checkpoint signal"
- _oncheckpointsignal.uninstallfuncinlist(f)
-def isinstalledoncheckpointsignal(f):
- "Checks if the function is called on checkpoint signal"
- return _oncheckpointsignal.isinstalledfuncinlist(f)
+ installcallback('oncheckpointsignal', f)
# ----------------------------------------------------------------------------
def onbreaksignal(f):
- installonbreaksignal(f)
+ installcallback('onbreaksignal', f)
return f
def installonbreaksignal(f):
- "Adds a function to the list of functions called on a break signal"
- _onbreaksignal.installfuncinlist(f)
-def uninstallonbreaksignal(f):
- "Removes the function from the list of functions called on a break signal"
- _onbreaksignal.uninstallfuncinlist(f)
-def isinstalledonbreaksignal(f):
- "Checks if the function is called on a break signal"
- return _onbreaksignal.isinstalledfuncinlist(f)
+ installcallback('onbreaksignal', f)
# ----------------------------------------------------------------------------
def callfromparticleinjection(f):
- installparticleinjection(f)
+ installcallback('particleinjection', f)
return f
def installparticleinjection(f):
- """
- Adds a user defined function that is to be called when particle
- injection happens, after the position advance and before deposition is
- called, allowing a user defined particle distribution to be injected
- each time step"""
- _particleinjection.installfuncinlist(f)
-def uninstallparticleinjection(f):
- "Removes the function installed by installparticleinjection"
- _particleinjection.uninstallfuncinlist(f)
-def isinstalledparticleinjection(f):
- "Checks if the function is called when particles injection happens"
- return _particleinjection.isinstalledfuncinlist(f)
-
-# ----------------------------------------------------------------------------
-def callfromappliedfields(f):
- raise Exception('applied fields call back not implemented yet')
- installappliedfields(f)
- return f
-def installappliedfields(f):
- """
- Adds a user defined function which can specify E and B fields which are applied
- to the particles during the particle advance.
- """
- raise Exception('applied fields call back not implemented yet')
- _appliedfields.installfuncinlist(f)
-def uninstallappliedfields(f):
- "Removes the function installed by installappliedfields"
- raise Exception('applied fields call back not implemented yet')
- _appliedfields.uninstallfuncinlist(f)
-def isinstalledappliedfields(f):
- "Checks if the function is called when which applies fields"
- raise Exception('applied fields call back not implemented yet')
- return _appliedfields.isinstalledfuncinlist(f)
+ installcallback('particleinjection', f)