diff options
Diffstat (limited to 'Source/Particles/PhysicalParticleContainer.cpp')
| -rw-r--r-- | Source/Particles/PhysicalParticleContainer.cpp | 45 |
1 files changed, 40 insertions, 5 deletions
diff --git a/Source/Particles/PhysicalParticleContainer.cpp b/Source/Particles/PhysicalParticleContainer.cpp index a1d4e1319..8ef4c13a9 100644 --- a/Source/Particles/PhysicalParticleContainer.cpp +++ b/Source/Particles/PhysicalParticleContainer.cpp @@ -82,6 +82,40 @@ PhysicalParticleContainer::PhysicalParticleContainer (AmrCore* amr_core, int isp pp.query("do_splitting", do_splitting); pp.query("split_type", split_type); pp.query("do_continuous_injection", do_continuous_injection); + // Whether to plot back-transformed (lab-frame) diagnostics + // for this species. + pp.query("do_boosted_frame_diags", do_boosted_frame_diags); + + pp.query("plot_species", plot_species); + int do_user_plot_vars; + do_user_plot_vars = pp.queryarr("plot_vars", plot_vars); + if (not do_user_plot_vars){ + // By default, all particle variables are dumped to plotfiles, + // including {x,y,z,ux,uy,uz}old variables when running in a + // boosted frame + if (WarpX::do_boosted_frame_diagnostic && do_boosted_frame_diags){ + plot_flags.resize(PIdx::nattribs + 6, 1); + } else { + plot_flags.resize(PIdx::nattribs, 1); + } + } else { + // Set plot_flag to 0 for all attribs + if (WarpX::do_boosted_frame_diagnostic && do_boosted_frame_diags){ + plot_flags.resize(PIdx::nattribs + 6, 0); + } else { + plot_flags.resize(PIdx::nattribs, 0); + } + // If not none, set plot_flags values to 1 for elements in plot_vars. + if (plot_vars[0] != "none"){ + for (const auto& var : plot_vars){ + // Return error if var not in PIdx. + AMREX_ALWAYS_ASSERT_WITH_MESSAGE( + ParticleStringNames::to_index.count(var), + "plot_vars argument not in ParticleStringNames"); + plot_flags[ParticleStringNames::to_index.at(var)] = 1; + } + } + } } PhysicalParticleContainer::PhysicalParticleContainer (AmrCore* amr_core) @@ -185,7 +219,7 @@ PhysicalParticleContainer::AddGaussianBeam(Real x_m, Real y_m, Real z_m, attribs[PIdx::uz] = u[2]; attribs[PIdx::w ] = weight; - if (WarpX::do_boosted_frame_diagnostic && WarpX::do_boosted_frame_particles) + if (WarpX::do_boosted_frame_diagnostic && do_boosted_frame_diags) { auto& particle_tile = DefineAndReturnParticleTile(0, 0, 0); particle_tile.push_back_real(particle_comps["xold"], x); @@ -469,7 +503,7 @@ PhysicalParticleContainer::AddPlasmaCPU (int lev, RealBox part_realbox) attribs[PIdx::uy] = u[1]; attribs[PIdx::uz] = u[2]; - if (WarpX::do_boosted_frame_diagnostic && WarpX::do_boosted_frame_particles) + if (WarpX::do_boosted_frame_diagnostic && do_boosted_frame_diags) { auto& particle_tile = DefineAndReturnParticleTile(lev, grid_id, tile_id); particle_tile.push_back_real(particle_comps["xold"], x); @@ -711,7 +745,7 @@ PhysicalParticleContainer::AddPlasmaGPU (int lev, RealBox part_realbox) attribs[PIdx::uz] = u[2]; // note - this will be slow on the GPU, need to revisit - if (WarpX::do_boosted_frame_diagnostic && WarpX::do_boosted_frame_particles) + if (WarpX::do_boosted_frame_diagnostic && do_boosted_frame_diags) { auto& particle_tile = DefineAndReturnParticleTile(lev, grid_id, tile_id); particle_tile.push_back_real(particle_comps["xold"], x); @@ -801,7 +835,6 @@ FieldGatherES (const amrex::Vector<std::array<std::unique_ptr<amrex::MultiFab>, const auto& particles = pti.GetArrayOfStructs(); int nstride = particles.dataShape().first; const long np = pti.numParticles(); - auto& attribs = pti.GetAttribs(); auto& Exp = attribs[PIdx::Ex]; auto& Eyp = attribs[PIdx::Ey]; @@ -1686,7 +1719,7 @@ PhysicalParticleContainer::PushPX(WarpXParIter& pti, auto& Bzp = attribs[PIdx::Bz]; const long np = pti.numParticles(); - if (WarpX::do_boosted_frame_diagnostic && WarpX::do_boosted_frame_particles) + if (WarpX::do_boosted_frame_diagnostic && do_boosted_frame_diags) { auto& xpold = pti.GetAttribs(particle_comps["xold"]); auto& ypold = pti.GetAttribs(particle_comps["yold"]); @@ -1831,6 +1864,8 @@ void PhysicalParticleContainer::GetParticleSlice(const int direction, const Real // Note the the slice should always move in the negative boost direction. AMREX_ALWAYS_ASSERT(z_new < z_old); + AMREX_ALWAYS_ASSERT(do_boosted_frame_diags == 1); + const int nlevs = std::max(0, finestLevel()+1); // we figure out a box for coarse-grained rejection. If the RealBox corresponding to a |