aboutsummaryrefslogtreecommitdiff
path: root/Source/FieldSolver/FiniteDifferenceSolver/ComputeDivE.cpp (unfollow)
AgeCommit message (Collapse)AuthorFilesLines
2022-07-27ParticleReal for external fields and collisions (#3262)Gravatar David Grote 17-312/+313
* Use ParticleReal consistently in GetExternalFields * Use ParticleReal in Collision code * Use ParticleReal in Algorithms/KineticEnergy.H * Fix _prt in Algorithms/KineticEnergy.H
2022-07-26Frontier: Update JobscriptGravatar Axel Huebl 1-2/+2
`--cpus-per-task=8` is currently not working
2022-07-25[pre-commit.ci] pre-commit autoupdate (#3261)Gravatar pre-commit-ci[bot] 1-1/+1
updates: - [github.com/hadialqattan/pycln: v2.0.3 → v2.0.4](https://github.com/hadialqattan/pycln/compare/v2.0.3...v2.0.4) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-07-25AMReX: Weekly Update (#3260)Gravatar Axel Huebl 5-5/+5
2022-07-24Bug fix for BTD - particle BA, and geom, same as field buffer (#3056)Gravatar Revathi Jambunathan 6-106/+160
* fix BTD particle container BA, geom, and add assert for probhi == 0 * fix bug with mesh-refinement * delete commented line * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * with offset added, we dont need the assert anymore * similar to plotfile, openpmd also initializes tmp from pinned pc, and no need to reset BA * commenting out the assert * changes consistent with #3201 * unused var warning fix * Compute snapshot box at init, expand and shrink buffer BA and particle BA before and after redistribute, close buffer when klab_current == k_lo for that buffer * unused var * turning off particle output in BTD CI tests for plotfiles * reset particle BA only if species output is finite * add particle output for plotfile format for BTD tests * add openpmd diags back in 2d test case * fix input to have the right format Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-07-24Poisson Solver: Fix Bug w/ Semi-coarsening and EB (#3247)Gravatar Edoardo Zoni 1-1/+1
2022-07-22Fixes to allow mixed precision, ParticleReal float, Real double (#3239)Gravatar David Grote 5-2143/+2143
* Fixes to allow mixed precision, ParticleReal float, Real double * Fix for the optical depth * A different way of fixing QuantumSynchrotronEvolveOpticalDepth * In the QED code, consistently use ParticleReal
2022-07-22CI: Add Missing Regression Analysis (NCI corrector) (#3252)Gravatar Edoardo Zoni 3-0/+84
2022-07-22Add Python Callback Call when Checkpointing Signal is Received (#3251)Gravatar Roelof Groenewald 3-1/+17
2022-07-22Fix a bug in GPU version of Hankel Transform (#3253)Gravatar Weiqun Zhang 1-6/+6
amrex::Array4 is a 4D array that can be accessed with three spatial indices plus an optional component index. We must always provide all three spatial indices even in 2D.
2022-07-19Docs: gaussian beam `q_tot` is not optional (#3249)Gravatar Neïl Zaim 1-1/+1
2022-07-19D-T fusion (#3153)Gravatar Remi Lehe 15-8/+868
* initial work * fixed bugs and added species * update documentation * delete unused file * Add properties for neutron, hydrogen isotopes, helium isotopes * Update code to be more consistent * Correct typo * Parse deuterium-tritium fusion * Start putting in place the files for deuterium-tritium * Update documentation * Prepare structures for deuterium tritium * Fix typo * Fix compilation * Add neutron * Add correct formula for the cross-section * Correct compilation error * Fix nuclear fusion * Reset benchmarks * Prepare creation functor for 2-product fusion * First implementation of momentum initialization * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Use utility function for fusion * Minor modification of variable names * Fix GPU compilation * Fix single precision compilation * Update types * Use util function in P-B fusion * Correct compilation errors * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Correct errors * Update values of mass and charge * Correct compilation error * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Correct compilation error * Correct compilation error * Correct compilation error * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Reset benchmark * Use helium particle in proton-boron, to avoid resetting benchmark * Fixed proton-boron test * Revert "Fixed proton-boron test" This reverts commit 73c8d9d0be8417d5cd08a23daeebbc322c984808. * Incorporate Neil's recommendations * Reset benchmarks * Correct compilation errors * Add new deuterium tritium automated test * Correct formula of cross-section * Correct cross-section * Improve analysis script * Add test of energy conservation * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Add test of conservation of momentum * Progress in analysis script * Fix error in the initial energy of the deuterium particles * Add check of isotropy * Clean up the test script * Rewrite p_sq formula in a way to avoids machine-precision negative numbers * Add checksum * Clean up code * Apply suggestions from code review * Update PR according to comments * Update benchmark * Address additional comments * Numerical Literals Co-authored-by: Luca Fedeli <luca.fedeli@cea.fr> Co-authored-by: Neïl Zaim <49716072+NeilZaim@users.noreply.github.com>
2022-07-18Docs: New OLCF Machine (#3228)Gravatar Axel Huebl 4-0/+202
2022-07-18ABLASTR: Update Poisson Solver API (#3243)Gravatar Axel Huebl 2-14/+23
Update the Poisson Solver API to be more usable. Needed for ImpactX.
2022-07-18[pre-commit.ci] pre-commit autoupdate (#3246)Gravatar pre-commit-ci[bot] 1-1/+1
updates: - [github.com/hadialqattan/pycln: v2.0.1 → v2.0.3](https://github.com/hadialqattan/pycln/compare/v2.0.1...v2.0.3) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-07-18AMReX: Weekly Update (#3244)Gravatar Axel Huebl 5-5/+5
2022-07-14Remove Unused Allocations of Averaged MultiFabs (#3237)Gravatar Edoardo Zoni 1-18/+30
2022-07-14CMake: 3.20+ (#3196)Gravatar Axel Huebl 5-12/+6
We already use this version in ImpactX. The main reason is a severe simplifcation of CMake CUDA search logic that we can rely on. X-Ref.: https://github.com/AMReX-Codes/amrex/blob/2d931f63cb4d611d0d23d694726889647f8a482d/Tools/CMake/AMReXParallelBackends.cmake#L55
2022-07-13Refactor code in fusion module to avoid machine-precision issues (#3229)Gravatar Remi Lehe 3-14/+16
* Refactor code in fusion module to avoid machine-precision issues * Update formula
2022-07-12Fix: Write Used Inputs Once (#3234)Gravatar Axel Huebl 1-4/+6
Ooopsi, nearly killed a PFS again :D Only the IO processor should write this and not every rank on the planet.
2022-07-12Update 2D nuclear fusion test input file (#3230)Gravatar Neïl Zaim 2-65/+65
* Update 2D nuclear fusion test input file * Update Benchmarks
2022-07-12[pre-commit.ci] pre-commit autoupdate (#3226)Gravatar pre-commit-ci[bot] 1-1/+1
updates: - [github.com/hadialqattan/pycln: v1.3.5 → v2.0.1](https://github.com/hadialqattan/pycln/compare/v1.3.5...v2.0.1) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-07-12Add 2D tests for proton boron fusion (#2540)Gravatar Neïl Zaim 4-5/+391
* Add 2D tests for proton boron fusion * Apply suggestions from review * Fix WarpX-tests.ini * Update benchmarks
2022-07-11Docs: Update WarpX Reference (#3223)Gravatar Edoardo Zoni 1-2/+2
2022-07-09Cleanup how fields_to_plot = none is handled (#3219)Gravatar David Grote 7-21/+15
* For fields_to_plot=none, do allocation with ncomp=0 * Update AMReX Via ``` ./Tools/Release/updateAMReX.py ``` Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2022-07-09Release 22.07 (#3211)Gravatar Axel Huebl 12-18/+17
* AMReX: 22.07 * PICSAR: 22.07 * WarpX: 22.07 * SENSEI: Update to 4.0.0 * AMReX: 22.07-4-gcbdc6580ee Include SENSEI build fixes.
2022-07-08Improve Docs on max_grid_size/blocking_factor for RZ (#3221)Gravatar Edoardo Zoni 1-1/+2
2022-07-07Parse the quantity `zmax_plasma_to_compute_max_step` in PICMI (#3217)Gravatar Remi Lehe 1-0/+3
* Parse the quantity `zmax_plasma_to_compute_max_step` * Apply review comments
2022-07-06Initialize multi-physics module (ionization, QED) when restarting ↵Gravatar Remi Lehe 5-16/+29
simulations from checkpoints (#3194) * Move the initialization of multi-physics module earlier * Fix syntax error * Initialize multi-physics modules also when restarting the simulation
2022-07-05Add new entries in Physical Species properties (+ refactoring of the ↵Gravatar Luca Fedeli 23-362/+549
SpeciesPhysicalProperties file) (#3090) * initial work * fixed bugs and added species * update documentation * delete unused file * Add neutron * Fix nuclear fusion * Reset benchmarks * Update values of mass and charge * Correct compilation error * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci Co-authored-by: Remi Lehe <remi.lehe@normalesup.org> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-07-05[pre-commit.ci] pre-commit autoupdate (#3213)Gravatar pre-commit-ci[bot] 1-1/+1
updates: - [github.com/Lucas-C/pre-commit-hooks: v1.2.0 → v1.3.0](https://github.com/Lucas-C/pre-commit-hooks/compare/v1.2.0...v1.3.0) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-07-05Merge `FillBoundary` and `NodalSync` (`OneStep_multiJ`) (#3169)Gravatar Edoardo Zoni 5-109/+53
* Merge `FillBoundary` and `NodalSync` (`OneStep_multiJ`) * `NodalSync` Not Needed Anymore
2022-07-02Use amrex::RandomNormal in Maxwell-Boltzmann momentum injection (#3209)Gravatar Neïl Zaim 6-172/+167
* Use amrex::RandomNormal in Maxwell-Boltzmann momentum injection * Remove factor sqrt(2) in std calculation * Update benchmarks * Increase relative tolerance for Python_background_mcc checksum * Update Source/Initialization/InjectorMomentum.H Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com> Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>
2022-06-28[pre-commit.ci] pre-commit autoupdate (#3205)Gravatar pre-commit-ci[bot] 1-1/+1
updates: - [github.com/hadialqattan/pycln: v1.3.3 → v1.3.5](https://github.com/hadialqattan/pycln/compare/v1.3.3...v1.3.5) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-06-27AMReX: Weekly Update (#3204)Gravatar Axel Huebl 5-5/+5
2022-06-24Added `none` as an option for fields_to_plot (#2419)Gravatar David Grote 8-11/+92
* Added `none` as an option for fields_to_plot * Added CI test case * Further updates, for picmi and CI tests * Skip the call to amrex::WriteMultiLevelPlotfile when writing no fields * Now clears m_varnames_fields * Don't allocate m_mf_output if no varnames * Updated WarpX-tests.ini
2022-06-23Remove Unused Function `getcurrent` (#3197)Gravatar Edoardo Zoni 1-1/+0
2022-06-22AMReX/PICSAR: Weekly Update (#3192)Gravatar Axel Huebl 7-44/+44
* AMReX: Weekly Update * Reset: `reduced_diags_single_precision` * Reset: `background_mcc_dp_psp`
2022-06-21fix missing newline in documentation (#3193)Gravatar Luca Fedeli 1-0/+1
2022-06-20Remove temporary copy of MultiFab (#3190)Gravatar Marco Garten 1-10/+1
Use template specification of amrex::FillBoundary directly with comm_float_type in case of single-precision communication. Leave out FillBoundaryAndSync for now because it requires AMReX changes.
2022-06-20Use ablastr::utils::communication::FillBoundary instead of ↵Gravatar David Grote 1-2/+4
amrex::FillBoundary in PML_RZ (#3191)
2022-06-16Docs: Move LPI Experiment Citation (#3187)Gravatar Axel Huebl 1-5/+5
Moving a citation down to LPI.
2022-06-16Extract function for two-particle fusion reaction (#3175)Gravatar Remi Lehe 2-100/+192
* Extract function for fusion reaction between 2 particles * Extract function for two-particle momenta in fusion reaction * Apply suggestions from code review Co-authored-by: Neïl Zaim <49716072+NeilZaim@users.noreply.github.com> * Remove obsolete comment * Update Source/Particles/Collision/BinaryCollision/NuclearFusion/TwoProductFusionUtil.H Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com> Co-authored-by: Neïl Zaim <49716072+NeilZaim@users.noreply.github.com> Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>
2022-06-15ABLASTR: Compute Phi (#2994)Gravatar Axel Huebl 7-267/+473
* ABLASTR: Compute Phi Expose the computation of the electro-static potential for relativistic beams via ABLASTR for ImpactX. * Add `ablastr::fields::computePhi` Co-authored-by: Remi Lehe <remi.lehe@normalesup.org> * Cleanup: Old Comments Co-authored-by: Remi Lehe <remi.lehe@normalesup.org>
2022-06-14CMake: Generalize `CMAKE_INSTALL_CMAKEDIR` (#3180)Gravatar Axel Huebl 2-7/+10
* CMake: Generalize `CMAKE_INSTALL_CMAKEDIR` Generalize the control of the global `CMAKE_INSTALL_CMAKEDIR` variable. This way, we can control the variable in superbuilds that include ABLASTR, e.g., in ImpactX. * WarpXFunctions: Remove Unused Python Not (yet) used.
2022-06-14AMReX/PICSAR: Weekly Update (#3177)Gravatar Axel Huebl 5-5/+5
* AMReX: Weekly Update * AMReX: Bump Once More to 1a2fc3dbee1ce0c168cdb66710458757e92a0605
2022-06-14CMake: AMReX_PIC (`-fPIC`) for ABLASTR (#3181)Gravatar Axel Huebl 1-1/+1
Make sure that AMReX is also built with position independent code if the corresponding ABLASTR option is set.
2022-06-14openPMD-api: 0.14.5 (#3171)Gravatar Axel Huebl 1-1/+1
Automatically pull the lastet openPMD-api release, 0.14.5.
2022-06-14[pre-commit.ci] pre-commit autoupdate (#3178)Gravatar pre-commit-ci[bot] 1-1/+1
updates: - [github.com/pre-commit/pre-commit-hooks: v4.2.0 → v4.3.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.2.0...v4.3.0) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-06-13Extend MCC to accurately treat relativistic particles (#3118)Gravatar Roelof Groenewald 15-227/+541
* initial commit for MCC to support relativistic particles * proper calculation of collision energy when target mass is not much greater than projectile mass * fix bug with scattered velocity rotation to lab frame * refactor the MCC sequence for clarity * use cross-section input to determine energy limits when calculating the maximum collision frequency * code cleanup * updated CI tests * added Collisions section to Implementation Details in docs * reset benchmark for mixed precision MCC test and other more code cleanup * fix issue with single precision and simplified implementation * use `double` for particle mass and energy calculations in MCC * added comment to ImpactIonization.H explaining why `double`s are used for `energy` and `mass` * switch to round off safe version of energy calculation and switched to using u instead of v for gamma*v in ParticleUtils.H * update documentation * simplified expression for collision energy, updated docs * Add comment that the direct solver can be replaced for the MLMG solver once the issue with that solver is fixed (in the 1d MCC test)
generated by cgit v1.2.3 (git 2.46.0) at 2025-08-11 19:27:42 +0000