Updated 1D CI tests with particles because of update of yt (#3458)

* Updated 1D CI tests with particles

* Updated required version of yt to 4.1.0

* Fixed CI analysis of collisionXYZ

Fixed the fetching of the particle data

6 files changed, 27 insertions, 26 deletions

diff --git a/Examples/Tests/collision/analysis_collision_3d.py b/Examples/Tests/collision/analysis_collision_3d.py
index 3e4bda2f8..ee0c81d8f 100755
--- a/Examples/Tests/collision/analysis_collision_3d.py
+++ b/Examples/Tests/collision/analysis_collision_3d.py
@@ -70,12 +70,13 @@ for fn in fn_list:
     # load file
     ds  = yt.load( fn )
     ad  = ds.all_data()
-    px  = ad['particle_momentum_x'].to_ndarray()
+    pxe  = ad['electron', 'particle_momentum_x'].to_ndarray()
+    pxi  = ad['ion', 'particle_momentum_x'].to_ndarray()
     # get time index j
     j = int(fn[-5:])
     # compute error
-    vxe = numpy.mean(px[ 0:ne])/me/c
-    vxi = numpy.mean(px[ne:np])/mi/c
+    vxe = numpy.mean(pxe)/me/c
+    vxi = numpy.mean(pxi)/mi/c
     vxd = vxe - vxi
     fit = a*math.exp(b*j)
     error = error + abs(fit-vxd)
diff --git a/Regression/Checksum/benchmarks_json/Langmuir_multi_1d.json b/Regression/Checksum/benchmarks_json/Langmuir_multi_1d.json
index 0114f75c7..7586cca0a 100644
--- a/Regression/Checksum/benchmarks_json/Langmuir_multi_1d.json
+++ b/Regression/Checksum/benchmarks_json/Langmuir_multi_1d.json
@@ -2,9 +2,9 @@
   "electrons": {
     "particle_momentum_x": 0.0,
     "particle_momentum_y": 0.0,
-    "particle_momentum_z": 0.0,
-    "particle_position_x": 0.0,
-    "particle_weight": 0.0
+    "particle_momentum_z": 1.183644630083563e-22,
+    "particle_position_x": 2.560000000000000e-03,
+    "particle_weight": 8.000000000000000e+19
   },
   "lev=0": {
     "Bx": 0.0,
@@ -20,8 +20,8 @@
   "positrons": {
     "particle_momentum_x": 0.0,
     "particle_momentum_y": 0.0,
-    "particle_momentum_z": 0.0,
-    "particle_position_x": 0.0,
-    "particle_weight": 0.0
+    "particle_momentum_z": 1.183644630083563e-22,
+    "particle_position_x": 2.560000000000001e-03,
+    "particle_weight": 8.000000000000000e+19
   }
-}
\ No newline at end of file
+}
diff --git a/Regression/Checksum/benchmarks_json/LaserAcceleration_1d.json b/Regression/Checksum/benchmarks_json/LaserAcceleration_1d.json
index 243eaba41..83c305438 100644
--- a/Regression/Checksum/benchmarks_json/LaserAcceleration_1d.json
+++ b/Regression/Checksum/benchmarks_json/LaserAcceleration_1d.json
@@ -1,12 +1,12 @@
 {
   "electrons": {
     "particle_momentum_x": 0.0,
-    "particle_momentum_y": 0.0,
-    "particle_momentum_z": 0.0,
-    "particle_orig_z": 0.0,
-    "particle_position_x": 0.0,
-    "particle_regionofinterest": 0.0,
-    "particle_weight": 0.0
+    "particle_momentum_y": 1.2426858089556802e-20,
+    "particle_momentum_z": 1.4187765007430268e-21,
+    "particle_orig_z": 0.022432812500000038,
+    "particle_position_x": 0.02243266637270741,
+    "particle_regionofinterest": 40.0,
+    "particle_weight": 5.20625e+18
   },
   "lev=0": {
     "Bx": 178016.7504669478,
@@ -20,4 +20,4 @@
     "jz": 1108530282155.6707,
     "rho": 3127749.1976868743
   }
-}
\ No newline at end of file
+}
diff --git a/Regression/Checksum/benchmarks_json/Python_LaserAcceleration_1d.json b/Regression/Checksum/benchmarks_json/Python_LaserAcceleration_1d.json
index c0ac0141c..56eb71559 100644
--- a/Regression/Checksum/benchmarks_json/Python_LaserAcceleration_1d.json
+++ b/Regression/Checksum/benchmarks_json/Python_LaserAcceleration_1d.json
@@ -1,10 +1,10 @@
 {
   "electrons": {
     "particle_momentum_x": 0.0,
-    "particle_momentum_y": 0.0,
-    "particle_momentum_z": 0.0,
-    "particle_position_x": 0.0,
-    "particle_weight": 0.0
+    "particle_momentum_y": 1.2426858089556802e-20,
+    "particle_momentum_z": 1.4187765007430268e-21,
+    "particle_position_x": 0.02243266637270741,
+    "particle_weight": 5.20625e+18
   },
   "lev=0": {
     "Bx": 178016.7504669478,
@@ -18,4 +18,4 @@
     "jz": 1108530282155.6707,
     "rho": 3127749.1976868743
   }
-}
\ No newline at end of file
+}
diff --git a/Regression/Checksum/benchmarks_json/Python_PlasmaAcceleration1d.json b/Regression/Checksum/benchmarks_json/Python_PlasmaAcceleration1d.json
index f0cd35716..1dc134fd2 100644
--- a/Regression/Checksum/benchmarks_json/Python_PlasmaAcceleration1d.json
+++ b/Regression/Checksum/benchmarks_json/Python_PlasmaAcceleration1d.json
@@ -12,7 +12,7 @@
     "particle_momentum_x": 0.0,
     "particle_momentum_y": 0.0,
     "particle_momentum_z": 0.0,
-    "particle_position_x": 0.0,
-    "particle_weight": 0.0
+    "particle_position_x": 3.9920000000000724,
+    "particle_weight": 4.0000000000000456e+18
   }
-}
\ No newline at end of file
+}
diff --git a/setup.py b/setup.py
index 695e7328d..1dec15a38 100644
--- a/setup.py
+++ b/setup.py
@@ -307,7 +307,7 @@ setup(
     #    ]
     #},
     extras_require={
-        'all': ['openPMD-api~=0.14.2', 'openPMD-viewer~=1.1', 'yt>=4.0.1', 'matplotlib'],
+        'all': ['openPMD-api~=0.14.2', 'openPMD-viewer~=1.1', 'yt>=4.1.0', 'matplotlib'],
     },
     # cmdclass={'test': PyTest},
     # platforms='any',