Coupling WarpX with an ✨improved✨ version of the QED library (#1198)

* Initial work to couple improved QED module to WarpX

* WIP to couple with WarpX the new QED library

* Continuing work to couple the new version of the QED library with WarpX

* progress towards completing coupling with new version of QED library

* WarpX coupled with new version of QED library

* default behavior is to display table generation progress

* some host device functions are now device only

* fixed bug

* bugfixing

* updating tests

* updated test

* updated test

* added initial version of tests (not working)

* added check and updated a comment

* fixed bug

* added inputfiles and analysis script for new BW tests

* test for BW process are ready

* modified test

* make lgtm happy

* removed TABs

* initial work to add QS tests (not working)

* removed old tests

* fixed bug in script

* changed position of evolution of optical depth

* progress with QSR tests

* improved test

* very low energy photons are always eliminated

* added tests to regression suite

* improved test

* improved tests

* removed redundant parameter

* removed trailing white space

* updated documentation

* fix lgtm warnings

* fixed missing check on chi parameter

* fixed missing check on chi parameter & bugfixing

* improved comments

* increased tolerance in tests

* updated units in test

* now test succeds if the error is extremely small

* updated checksums

* fixed bug

* fixed some unused or uninitialized variables warnings

* now using ignore_unused instead of commenting out some variables

* fixed warnings

* partial fix of a test

* fixed test

* fixed test

* added checksums

* fixed tests

* fixed benchmark for qed_schwinger2

* removed checksums for tests which do no exist anymore

* fixed checksums for several qed tests

* fixed checksums for several qed tests

* fixed checksums

* removed unwanted checksum

* fixed checksum

* removed files which should have been deleted

* add some const

* [skip ci] added some docstrings and some const

* Update Source/Particles/ElementaryProcess/QEDInternals/BreitWheelerEngineWrapper.H

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/ElementaryProcess/QEDInternals/BreitWheelerEngineWrapper.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/ElementaryProcess/QEDInternals/QuantumSyncEngineWrapper.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* added some docstrings and some const

* replaced ManagedVectors with DeviceVectors

* Update Source/Particles/ElementaryProcess/QEDInternals/QedWrapperCommons.H

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* added some const

* removed unwanted assert

* updated comment

* changed position of GPU synchronization directive

* Update Docs/source/running_cpp/parameters.rst

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Examples/Modules/qed/quantum_synchrotron/analysis.py

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Examples/Modules/qed/quantum_synchrotron/analysis.py

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Examples/Modules/qed/breit_wheeler/analysis.py

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Examples/Modules/qed/breit_wheeler/analysis.py

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* add do_plot option to some analysis scripts

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* uncomment a line

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* simplified input scripts for BW tests

* simplified input scripts for QS tests

* removed unwanted files

* simplified analysis script

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* reverted modification to schwinger analysis script

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* remove outdated comment

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Source/Particles/MultiParticleContainer.cpp

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* fix warnings

* made test more robust

* reset benchmark for qed_breit_wheeler_2d

* fixed bug in test

* make test more robust

* made test more robust

* Update Examples/Modules/qed/quantum_synchrotron/analysis.py

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update Examples/Modules/qed/quantum_synchrotron/analysis.py

Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>

* Update run_test.sh

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

Co-authored-by: Tools <warpx@lbl.gov>
Co-authored-by: NeilZaim <49716072+NeilZaim@users.noreply.github.com>
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

1 files changed, 0 insertions, 60 deletions

diff --git a/Examples/Modules/qed/quantum_synchrotron/analysis_2d_tau_init.py b/Examples/Modules/qed/quantum_synchrotron/analysis_2d_tau_init.py
deleted file mode 100755
index b21441fb7..000000000
--- a/Examples/Modules/qed/quantum_synchrotron/analysis_2d_tau_init.py
+++ /dev/null
@@ -1,60 +0,0 @@
-#! /usr/bin/env python
-
-# Copyright 2019 Luca Fedeli, Maxence Thevenet
-#
-# This file is part of WarpX.
-#
-# License: BSD-3-Clause-LBNL
-
-import yt
-import numpy as np
-import scipy.stats as st
-import sys
-sys.path.insert(1, '../../../../warpx/Regression/Checksum/')
-import checksumAPI
-
-# This script checks if electrons and positrons initialized with
-# Quantum Synchrotron process enabled
-# do actually have an exponentially distributed optical depth
-
-# Tolerance
-tolerance_rel = 1e-2
-print("tolerance_rel: " + str(tolerance_rel))
-
-def check():
-    filename = sys.argv[1]
-    data_set = yt.load(filename)
-
-    all_data = data_set.all_data()
-    res_ele_tau = all_data["electrons", 'particle_optical_depth_QSR']
-    res_pos_tau = all_data["positrons", 'particle_optical_depth_QSR']
-
-    loc_ele, scale_ele = st.expon.fit(res_ele_tau)
-    loc_pos, scale_pos = st.expon.fit(res_pos_tau)
-
-    # loc should be very close to 0, scale should be very close to 1
-    error_rel = np.abs(loc_ele - 0)
-    print("error_rel loc_ele: " + str(error_rel))
-    assert( error_rel < tolerance_rel )
-
-    error_rel = np.abs(loc_pos - 0)
-    print("error_rel loc_pos: " + str(error_rel))
-    assert( error_rel < tolerance_rel )
-
-    error_rel = np.abs(scale_ele - 1)
-    print("error_rel scale_ele: " + str(error_rel))
-    assert( error_rel < tolerance_rel )
-
-    error_rel = np.abs(scale_pos - 1)
-    print("error_rel scale_pos: " + str(error_rel))
-    assert( error_rel < tolerance_rel )
-
-    test_name = filename[:-9] # Could also be os.path.split(os.getcwd())[1]
-    checksumAPI.evaluate_checksum(test_name, filename)
-
-def main():
-    check()
-
-if __name__ == "__main__":
-    main()
-