Reduced diagnostics: charge on the embedded boundary (#3648)

* Prepare structure to compute charge inside boundary

* Add calculation without embedded boundaries

* Use EB area fraction

* Skip cells that are not cut-cells

* Choose point outside of the EB

* Skip covered or regular boxes

* Only compile with EB and 3D support

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Add test for charge on EB

* Add automated test

* Add automated Python test

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Avoid compilation error

* Enable PICMI test

* Rename ChargeInsideBoundary to ChargeOnEB

* Update comments

* Add parser for weighting

* Call weighting function

* Call weighting function

* Add documentation

* Update Python test

* Add Python test

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix compilation errors

* Fix access of attribute on GPU

* Use difference in surface area

* Pick smaller radius in test

This is in order to avoid the influence of the boundaries

* Update benchmark

* Update benchmark

* Properly add diagnostic

* Update radius in analysis

* Update analysis script

* Relax tolerance

* Fix tests

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update Python tests

* Apply suggestions from code review

Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>

* Test one-eighth from Python

* Add one-eighth charge in tests

* Handle ChargeOnEB

* Remove bug when handling charge on eb

* Fix Python errors

* Fix Python issues

* Use more natural setting of tilebox

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>

0 files changed, 0 insertions, 0 deletions