1D3V Cartesian Support (#2307)

* Build System: Add 1D Geometry

* test PR

* test PR

* 1D cartesian yee algorithm

* fixed typo

* Fixes for PML

* 1D support related multiple changes

* Fix compilation

* change 1D to 1D_Z

* 1D Field Gather and typo fix

* 1D Charge Deposition

* Particle Pusher

* multiple changes related to 1D

* 1D diagnostics and initialization

* PlasmaInjector and PEC fixes for 1D

* clean-up delete diags file

* mobility 1D laser particle and bilinear filter

* deleted diags files

* update laser particle weight formula

* delete diags files

* Azure: Add 1D Cartesian Runner

* 1D fixes for FieldProbe

* Update Docs/source/developers/dimensionality.rst

Co-authored-by: Remi Lehe <remi.lehe@normalesup.org>

* 1d laser injection and langmuir test input files

* 1d tests

* clean up : delete print statements

* analyse simulation result for laser injection and Langmuir tests

* EOL

* delete input files for which there are no automated tests

* delete input files for which there are no automated tests

* add ignore_unused to remove warnings

* remove space

* Fix compilation issues

* fix error : macro name must be an identifier

* Small bug fix

* cleanup Python script for analysis

* bug fix

* bug fix

* Update ParticleProbe: Check 1D in-domain

* Update Source/Make.WarpX

* Update .azure-pipelines.yml

* Add USE_OPENPMD=FALSE to .azure-pipeline.yml

* resolve conflict

* resolve conflict

* fix typo

* Correct out-of-bound access

* Fix Particle BC in WarpXParticleContainer and correct path to checksumAPI in python analysis scripts

* EOL

* Fix bug : accessing out of bound index of cell in 1D

* remove 1d test for cartesian3d

* Fix CI check

* Slight style change

* Address review comments

* Fix GPU compilation Filter.cpp

* Fix CI

* Fix Indentation

* Address review comments

* More consistent ifdef for dimension bigger than 1

* Update Examples/Tests/Langmuir/analysis_langmuir_multi_1d.py

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update GNUmakefile

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Regression/prepare_file_ci.py

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/FieldSolver/FiniteDifferenceSolver/FiniteDifferenceAlgorithms/CartesianCKCAlgorithm.H

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/FieldSolver/FiniteDifferenceSolver/FiniteDifferenceAlgorithms/CartesianNodalAlgorithm.H

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/Filter/Filter.cpp

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/Filter/Filter.cpp

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/Filter/Filter.cpp

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/Filter/Filter.cpp

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/Initialization/PlasmaInjector.cpp

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* Update Source/Initialization/PlasmaInjector.cpp

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>

* add comment inline to explain twice push_back

* Add amrex::Abort for NCIGodfreyFilter

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Prabhat Kumar <prabhatkumar@kraken.dhcp.lbl.gov>
Co-authored-by: Remi Lehe <remi.lehe@normalesup.org>
Co-authored-by: Remi Lehe <rlehe@lbl.gov>

1 files changed, 6 insertions, 1 deletions

diff --git a/Source/Particles/ParticleBoundaryBuffer.cpp b/Source/Particles/ParticleBoundaryBuffer.cpp
index 64efcefeb..d8856c297 100644
--- a/Source/Particles/ParticleBoundaryBuffer.cpp
+++ b/Source/Particles/ParticleBoundaryBuffer.cpp
@@ -69,12 +69,17 @@ ParticleBoundaryBuffer::ParticleBoundaryBuffer ()
     for (int ispecies = 0; ispecies < numSpecies(); ++ispecies)
     {
         amrex::ParmParse pp_species(getSpeciesNames()[ispecies]);
+#if AMREX_SPACEDIM == 1
+        pp_species.query("save_particles_at_zlo", m_do_boundary_buffer[0][ispecies]);
+        pp_species.query("save_particles_at_zhi", m_do_boundary_buffer[1][ispecies]);
+#elif AMREX_SPACEDIM == 2
         pp_species.query("save_particles_at_xlo", m_do_boundary_buffer[0][ispecies]);
         pp_species.query("save_particles_at_xhi", m_do_boundary_buffer[1][ispecies]);
-#if AMREX_SPACEDIM == 2
         pp_species.query("save_particles_at_zlo", m_do_boundary_buffer[2][ispecies]);
         pp_species.query("save_particles_at_zhi", m_do_boundary_buffer[3][ispecies]);
 #else
+        pp_species.query("save_particles_at_xlo", m_do_boundary_buffer[0][ispecies]);
+        pp_species.query("save_particles_at_xhi", m_do_boundary_buffer[1][ispecies]);
         pp_species.query("save_particles_at_ylo", m_do_boundary_buffer[2][ispecies]);
         pp_species.query("save_particles_at_yhi", m_do_boundary_buffer[3][ispecies]);
         pp_species.query("save_particles_at_zlo", m_do_boundary_buffer[4][ispecies]);