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* Implement new PML PSATD equations
* Update CI test and benchmark
* Compute coefficients C1,...,C22 on the fly
* Add check on initial energy from diagnostics
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This PR fixes the source of several compilation warnings.
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
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* Introduce option to update E with/without rho
* Clean up
* Implement current correction for Galilean PSATD (needs bug fix)
* Include equations in docs
* Fix EOL whitespaces error
* Small clean-up
* Implement Galilean PSATD update without rho
* Clean up
* Fix bug in current correction
* Fix EOL whitespaces
* Clean up
* Fix unused import
* Remove unused variable
* [skip CI] Improve docs
* Clean up style
* Fix EOL whitespaces
* Fix EOL whitespaces
* Clean up style
* Revert analysis script to old status
* [skip CI] Clean up style
* Make equations more human-readable and improve comments
* 2D test with current correction works
* Temporary build fix as in #1197
* 3D test with current correction works
* Rename th and th_star as theta and theta_star
* Fix a couple of wrong comments
* Add vertical spaces to improve readability
* Improve documentation
* Function CurrentCorrection is now pure
* 2D benchmark fields data are now correct
* Add limits of coefficients for nu=-1
* Change default of update_with_rho for Galilean PSATD
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* Added stub for current correction in RZ spectral solver
* Start implementation of Vay deposition
* Continue implementation of Vay deposition
* Correct deposition of D
* Add phase shift for staggered currents
* Small clean-up
* Fix units in deposition of D
* Implement average of cumulative sum (needs bug fix)
* Start fixing bug in average of cumulative sum
* Still debugging
* Cumulative sums should be correct now
* Subtract averages of cumulative sums:
- current implementation: cumulative sums, inverse Fourier transform, subtraction of averages
- needs to be tested (including units of D after Vay deposition)
- needs to be shortened (too many loops over boxes and ParallelFors)
* [skip CI] Clean up and fix units
* Still fixing units
* [skip CI] Remove temporarily averages of cumulative sums
* [skip CI] Remove distinction between staggered and nodal
* Vay and Esirkepov similar results on periodic single box:
TODO:
- debug (charge not conserved);
- try using compute_shifted_shape_factor as in Esirkepov deposition;
- clean up;
- try on multiple boxes and with correction of mode at 0 frequency.
* [skip CI] Clean up
* Fix bug in 3D deposition
* [skip CI] Clean up
* Fix 2D and 3D implementation:
- simulation results agree between direct and Vay deposition in both 2D and 3D
- Travis CI tests should pass except for check of charge conservation (debug)
* Small clean-up
* Fix bug when compiling in RZ geometry
* Add benchmark json files (will be reset later)
* Do not set zero current at zero frequency
* [skip CI] Revert last commit and clean up
* Fix small bug after reverting commit
* Set nodal test first on Travis
* Fix benchmark for nodal test in 3D
* Fix particle output for nodal test in 3D
* Fix bugs due to staggering
* Rename current nodal Travis tests
* Add Travis tests staggered in 2D and 3D
* Further clean-up after bug fix
* Abort when using Vay deposition with domain decomposition
* Add optional argument of index type to forward FFT
* Fourier shifts can be private members as before
* Small clean-up
* Clean up and improve Doxygen documentation
* Fix small bug in analysis script for 2D tests
* Fix tests (remove E and B fields from particle diags)
* Add option to fill guard cells and docs
* Fix value of last guard cell by enforcing periodicity
* Revert changes merged from #1121
* Clean up style
* Improve docs
* Fix forgotten alignment
* Improve docs
* Make base class functions VayDeposition pure
Co-authored-by: Dave Grote <dpgrote@lbl.gov>
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- Use `""` for WarpX-local includes
- Order: WarpX `""`, AMReX `<>`, other third party includes `<>`
- Add dir prefixes for WarpX
Add order to includes by including from `Source/` onward and keeping
directory prefixes of non-local includes for clarity.
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* Read Galilean velocity
* Prepare structures for Galilean solver
* Started implementing Galilean equations
* Analytical limits for X1, X2, X3, X4 coefficients added
* Slight changes added
* Added Galilean position pusher
* Scale galilean velocity
* Remove unneeded Abort
* Fix Galilean pusher
* Allocate Theta2 array
* Fix definition of coefficients
* Increase guard cells for Galilean
* Add guard cell in particle exchange
* Type corrected
* v_gal added to warpx_current_deposition
* v_gal added to WarpXParticleContainer.H
* Bug fixed - update particle x-position over one time step
* Fix issues with merge from dev
* Preparation for merging dev into galilean.
* Adding galilean shift
* Implemented galilean shift
* Changed method's name from GalileanShift to ShiftGalileanBoundary
* Added doxygen string for ShiftGalileanBoundary
* Removed never used method LowerCornerWithCentering
* Removed temporary comments
* Removed dt as a variable from DepositCharge method and its dependencies
* Converted tab to spaces
* Removed EOL white space
* Add documentation and automated tests
* Fix compilation error
* Add automated test
* Update automated test
* Removed temporary used galilean shift
* Removed temporary used particle's push for Galilean PSATD
* Removed unused statement
* Remove EOL white space.
* Added zero shift for LowerCorner in RZ geometry
* Minor changes to Galilean implementation
* Modifications for GPU
* Fix typo
Co-authored-by: Remi Lehe <remi.lehe@normalesup.org>
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Edoardo Zoni
Luca Fedeli
Axel Huebl
Olga Shapoval
Tools
Remi Lehe
