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* add clang-tidy workflow
* fix missing newline
* [pre-commit.ci] auto fixes from pre-commit.com hooks
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* make clang.14.sh executable
* remove non explicitly selected checks
* complete list of dependencies
* fix bug
* specify path of clang-tidy file
* fix bug
* add new check
* remove one check
* add magic numbers check
* removed one check
* keep only one check
* Docs: Conda Dev w/ Boost (#3911)
Add the `boost` package to the conda developer environment.
Used for QED table generation.
* Fix typo in Adastra cluster documentation (#3918)
* add back three checks
* prepare clang-tidy wrapper
* actually use clang-tidy in the script
* test
* fix bug
* actually use clang-tidy
* fixed bug
* fixed bug
* fixed bug
* fixed bug
* remove all checks except the selected 3
* fixed bug
* fixed bug
* fixed bug
* enforce const correctness using clang-tidy
* remove one check
* Fix Concurrency Issue
* BLAS++/LAPACK++ for RZ+PSATD
* Build all 4 WarpX DIMS
* add few echo for test purposes
* try to debug mysterious error
* don't test RZ with clang-tidy
* add back RZ test
* add some const
* fix bug
* check also header files
* remove header filter since it does not work as expected
* fixed bug
* check also WarpX headers
* fix bugs
* continue enforcing const correctness
* continue enforcing const correctness
* [pre-commit.ci] auto fixes from pre-commit.com hooks
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* fixed bug
* fix bugs and add new const
* clean .clang-tidy
* make regex more precise according to Weiqun's suggestion
* add more const
* fix bugs
* fix bug
* silence warning on float comparison
* fixed bug
* fixed bugs
* fix bug and add const
* fixed bugs
* fix bug
* fix bug
* fix bug
* fixed bug
* fix bug
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* replace amrex::Abort with WarpX macros
* use amrex::Abort in a GPU kernel
* use amrex::Abort in a GPU kernel
* use amrex::Abort in a GPU kernel
* use amrex::Abort in a GPU kernel
* use amrex::Abort in a GPU kernel
* use amrex::Abort in a GPU kernel
* adding back missing include
* use amrex::Abort in a GPU kernel
* use amrex::Abort in a GPU kernel
* use amrex::Abort in a GPU kernel
* bump precision
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* Implement D+D -> n+He3 fusion
* Fix logic for fusion reaction
* Check products in a different place
* Correct compilation error
* Implement D+D -> T+p cross-section
* Update example
* Use clearer naming convention for fusion types
* Revert changes to example input script
* Add analysis script
* Progress on tests
* Use 2 species in test
* Correct momentum of colliding species
* Update test
* Update test
* Generalize species names in fusion tests
* Update benchmarks
* Correct typo
* Updated scripts
* Update script so that it works for D+T and D+D
* Update CI
* Add benchmark file
* Correct typo
* Fix compilation on GPU
* Update RZ CI test
* Implement Deuterium-Helium reaction
* Apply suggestions from code review
Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>
Co-authored-by: Edoardo Zoni <59625522+EZoni@users.noreply.github.com>
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* initial work
* fixed bugs and added species
* update documentation
* delete unused file
* Add properties for neutron, hydrogen isotopes, helium isotopes
* Update code to be more consistent
* Correct typo
* Parse deuterium-tritium fusion
* Start putting in place the files for deuterium-tritium
* Update documentation
* Prepare structures for deuterium tritium
* Fix typo
* Fix compilation
* Add neutron
* Add correct formula for the cross-section
* Correct compilation error
* Fix nuclear fusion
* Reset benchmarks
* Prepare creation functor for 2-product fusion
* First implementation of momentum initialization
* [pre-commit.ci] auto fixes from pre-commit.com hooks
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* Use utility function for fusion
* Minor modification of variable names
* Fix GPU compilation
* Fix single precision compilation
* Update types
* Use util function in P-B fusion
* Correct compilation errors
* [pre-commit.ci] auto fixes from pre-commit.com hooks
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* Correct errors
* Update values of mass and charge
* Correct compilation error
* [pre-commit.ci] auto fixes from pre-commit.com hooks
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* Correct compilation error
* Correct compilation error
* Correct compilation error
* [pre-commit.ci] auto fixes from pre-commit.com hooks
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* Reset benchmark
* Use helium particle in proton-boron, to avoid resetting benchmark
* Fixed proton-boron test
* Revert "Fixed proton-boron test"
This reverts commit 73c8d9d0be8417d5cd08a23daeebbc322c984808.
* Incorporate Neil's recommendations
* Reset benchmarks
* Correct compilation errors
* Add new deuterium tritium automated test
* Correct formula of cross-section
* Correct cross-section
* Improve analysis script
* Add test of energy conservation
* [pre-commit.ci] auto fixes from pre-commit.com hooks
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* Add test of conservation of momentum
* Progress in analysis script
* Fix error in the initial energy of the deuterium particles
* Add check of isotropy
* Clean up the test script
* Rewrite p_sq formula in a way to avoids machine-precision negative numbers
* Add checksum
* Clean up code
* Apply suggestions from code review
* Update PR according to comments
* Update benchmark
* Address additional comments
* Numerical Literals
Co-authored-by: Luca Fedeli <luca.fedeli@cea.fr>
Co-authored-by: Neïl Zaim <49716072+NeilZaim@users.noreply.github.com>
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* BinaryCollision: implement particle creation functor
* Apply suggestions from code review (restrict keyword)
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
* Don't restrict the particle pointers
* Use atomicSetID
* Use more restricts
* Don't use auto restrict
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
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* Add structure for proton-boron fusion module
* Fix clang compile error
* Generalize structure for other nuclear fusion types
* Workaround: try to use std::vectors to fix clang compile error
* Simplify workaround for clang
* Rebase on 2245 and add empty particle creation functor
* Apply suggestions from code review
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
* Add couple of consts and runtime assert
* Add another const
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
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Luca Fedeli
Remi Lehe
Neïl Zaim
