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#ifndef WARPX_FULLDIAGNOSTICS_H_
#define WARPX_FULLDIAGNOSTICS_H_
#include "Diagnostics.H"
#include "Utils/Parser/IntervalsParser.H"
#include <string>
class
FullDiagnostics final : public Diagnostics
{
public:
FullDiagnostics (int i, std::string name);
private:
/** Read user-requested parameters for full diagnostics */
void ReadParameters ();
/** Determines timesteps at which full diagnostics are written to file */
utils::parser::IntervalsParser m_intervals;
/** Whether to plot raw (i.e., NOT cell-centered) fields */
bool m_plot_raw_fields = false;
/** Whether to plot guard cells of raw fields */
bool m_plot_raw_fields_guards = false;
/** Whether to dump the RZ modes */
bool m_dump_rz_modes = false;
/** Whether the field solver deposits current density, if not it will be done
* before writing the diagnostic.
*/
bool m_solver_deposits_current = true;
/** Flush m_mf_output and particles to file for the i^th buffer */
void Flush (int i_buffer) override;
/** Flush raw data */
void FlushRaw ();
/** whether to compute and pack cell-centered data in m_mf_output
* \param[in] step current time step
* \param[in] force_flush if true, return true for any step since output must be
computed in this case
* \return bool, whether to flush
*/
bool DoComputeAndPack (int step, bool force_flush=false) override;
/** whether to flush at this time step
* \param[in] step current time step
* \param[in] i_buffer index of a back-transformed snapshot
* \param[in] force_flush if true, return true for any step
* \return bool, whether to flush
*/
bool DoDump (int step, int i_buffer, bool force_flush=false) override;
/** Append varnames with names for all modes of a field
* \param[in] field field name (includes component, e.g., Er)
* \param[in] ncomp number of components (modes, real and imag)
*/
void AddRZModesToOutputNames (const std::string& field, int ncomp);
/** Define the cell-centered multifab m_mf_output depending on user-defined
* lo and hi and coarsening ratio. This MultiFab may have a different BoxArray and
* DistributionMap than field MultiFabs in the simulation.
*
* \param[in] i_buffer index of a back-transformed snapshot
* \param[in] lev level on which source multifabs are defined
*/
void InitializeBufferData ( int i_buffer, int lev, bool restart=false ) override;
/** Initialize functors that store pointers to the RZ fields requested by the user.
* \param[in] lev level on which the vector of unique_ptrs to field functors is initialized.
*/
void InitializeFieldFunctorsRZopenPMD (int lev) override;
/** Append m_all_field_functors[lev] with all modes of all components of E B and j
* and add name to varnames.
* \param[in] lev level on which source multifabs are defined.
*/
void AddRZModesToDiags (int lev);
/** Initialize functors that store pointers to the fields requested by the user.
* \param[in] lev level on which the vector of unique_ptrs to field functors is initialized.
*/
void InitializeFieldFunctors (int lev) override;
void InitializeParticleBuffer () override;
/** Prepare field data to be used for diagnostics */
void PrepareFieldDataForOutput () override;
/** Prepare particle data to be used for diagnostics. */
void PrepareParticleDataForOutput() override {}
/** Update the physical extent of the diagnostic domain for moving window and
* galilean shift simulations
*
* \param[in] step current time step
*/
void MovingWindowAndGalileanDomainShift (int step) override;
/** This function queries deprecated input parameters and abort
* the run if one of them is specified.
*/
void BackwardCompatibility ();
};
#endif // WARPX_FULLDIAGNOSTICS_H_
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